Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm38158-201ENSMUST00000194617 339 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm18935-201ENSMUST00000212692 664 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Snord83b-201ENSMUST00000104546 94 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm29396-201ENSMUST00000185659 716 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm19931-201ENSMUST00000198920 368 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.04□□□□□ -0.16
TraipQ8VIG6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm32025-201ENSMUST00000217960 307 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm7046-201ENSMUST00000221351 977 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.04□□□□□ -0.16
TraipQ8VIG6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TraipQ8VIG6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.03□□□□□ -0.16
TraipQ8VIG6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm14723-201ENSMUST00000118686 215 ntBASIC14.03□□□□□ -0.16
TraipQ8VIG6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.03□□□□□ -0.16
TraipQ8VIG6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm17208-201ENSMUST00000168388 535 ntBASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms