Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg8Q8VE18 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg8Q8VE18 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.05□□□□□ -0.16
Smg8Q8VE18 Gm13786-201ENSMUST00000122371 333 ntBASIC14.05□□□□□ -0.16
Smg8Q8VE18 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Gm32025-201ENSMUST00000217960 307 ntBASIC14.05□□□□□ -0.16
Smg8Q8VE18 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.05□□□□□ -0.16
Smg8Q8VE18 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.05□□□□□ -0.16
Smg8Q8VE18 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smg8Q8VE18 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.04□□□□□ -0.16
Smg8Q8VE18 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.04□□□□□ -0.16
Smg8Q8VE18 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Gm17208-201ENSMUST00000168388 535 ntBASIC14.04□□□□□ -0.16
Smg8Q8VE18 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smg8Q8VE18 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.03□□□□□ -0.16
Smg8Q8VE18 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Mir7221-201ENSMUST00000184009 72 ntBASIC14.03□□□□□ -0.16
Smg8Q8VE18 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Gm29396-201ENSMUST00000185659 716 ntBASIC14.03□□□□□ -0.16
Smg8Q8VE18 Gm38266-201ENSMUST00000194931 421 ntBASIC14.03□□□□□ -0.16
Smg8Q8VE18 Gm43822-201ENSMUST00000200285 476 ntBASIC14.03□□□□□ -0.16
Smg8Q8VE18 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smg8Q8VE18 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms