Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm22189-201ENSMUST00000103822 86 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm9797-201ENSMUST00000052902 613 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Syt7-205ENSMUST00000224135 1557 ntBASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf8Q8VC56 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mir698-201ENSMUST00000102164 109 ntBASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Gm37444-201ENSMUST00000193605 439 ntBASIC12.75□□□□□ -0.37
Rnf8Q8VC56 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Rnf8Q8VC56 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf8Q8VC56 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms