Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.47□□□□□ -0.09
Rpap2Q8VC34 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Gm11814-201ENSMUST00000119515 929 ntBASIC14.47□□□□□ -0.09
Rpap2Q8VC34 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Gm7653-201ENSMUST00000214567 508 ntBASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpap2Q8VC34 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rpap2Q8VC34 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpap2Q8VC34 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm11478-201ENSMUST00000117851 599 ntBASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm8652-201ENSMUST00000181363 964 ntBASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms