Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm11803-201ENSMUST00000119966 444 ntBASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm10156-201ENSMUST00000122364 462 ntBASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm27486-201ENSMUST00000184923 80 ntBASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sf3a1Q8K4Z5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sf3a1Q8K4Z5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Gm24196-201ENSMUST00000179161 110 ntBASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Gm27839-201ENSMUST00000184242 106 ntBASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sf3a1Q8K4Z5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Mir874-201ENSMUST00000104769 76 ntBASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm8213-201ENSMUST00000118191 441 ntBASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm44069-201ENSMUST00000204898 506 ntBASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms