Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox30Q8CGW4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Sox30Q8CGW4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox30Q8CGW4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Mir686-201ENSMUST00000102174 109 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Gm14701-201ENSMUST00000117156 348 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Gm26308-201ENSMUST00000157768 69 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Gm29667-201ENSMUST00000190817 490 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox30Q8CGW4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Gm22189-201ENSMUST00000103822 86 ntBASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.41□□□□□ -0.1
Sox30Q8CGW4 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.41□□□□□ -0.1
Sox30Q8CGW4 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.41□□□□□ -0.1
Sox30Q8CGW4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox30Q8CGW4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Gm2213-201ENSMUST00000197485 688 ntBASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Gm42550-201ENSMUST00000201553 960 ntBASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Gm9797-201ENSMUST00000052902 613 ntBASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox30Q8CGW4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sox30Q8CGW4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox30Q8CGW4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox30Q8CGW4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox30Q8CGW4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Sox30Q8CGW4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox30Q8CGW4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox30Q8CGW4 Gm13616-201ENSMUST00000120600 222 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms