Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.88□□□□□ -0.35
Rab43Q8CG50 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab43Q8CG50 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm14381-201ENSMUST00000122105 414 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Mospd4-201ENSMUST00000180618 576 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm27320-201ENSMUST00000184892 109 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm6458-201ENSMUST00000211573 635 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm7046-201ENSMUST00000221351 977 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm8227-201ENSMUST00000223306 571 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab43Q8CG50 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.87□□□□□ -0.35
Rab43Q8CG50 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm15236-201ENSMUST00000117309 379 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm4986-201ENSMUST00000119731 549 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm13297-201ENSMUST00000120205 934 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm3890-201ENSMUST00000182416 207 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm38158-201ENSMUST00000194617 339 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Gm5781-201ENSMUST00000219792 443 ntBASIC12.86□□□□□ -0.35
Rab43Q8CG50 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rab43Q8CG50 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab43Q8CG50 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms