Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm6912-201ENSMUST00000117218 544 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm15653-201ENSMUST00000119247 907 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm15467-201ENSMUST00000120582 445 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc28bQ8CEG5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Mir6990-201ENSMUST00000183724 91 ntBASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm10766-202ENSMUST00000194123 606 ntBASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm43125-201ENSMUST00000201724 730 ntBASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc28bQ8CEG5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms