Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm10268-201ENSMUST00000085340 555 ntBASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Acot6-202ENSMUST00000222921 3622 ntBASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf31Q8CCF0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm7029-201ENSMUST00000173226 450 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm26927-201ENSMUST00000182385 965 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm5370-201ENSMUST00000187187 574 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf31Q8CCF0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf31Q8CCF0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms