Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps53Q8CCB4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gm29649-201ENSMUST00000185649 419 ntBASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gm6091-201ENSMUST00000098307 165 ntBASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps53Q8CCB4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms