Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ptcd1Q8C2E4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm24830-201ENSMUST00000102024 166 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm14263-201ENSMUST00000117955 746 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm13461-201ENSMUST00000120980 662 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Mir5120-201ENSMUST00000175020 78 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm25890-201ENSMUST00000177643 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm22614-201ENSMUST00000178300 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm44069-201ENSMUST00000204898 506 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm19163-201ENSMUST00000223313 780 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm22042-201ENSMUST00000082989 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm26232-201ENSMUST00000083360 166 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm24136-201ENSMUST00000083374 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gm26110-201ENSMUST00000083971 165 ntBASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptcd1Q8C2E4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Gm16202-201ENSMUST00000117532 544 ntBASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Gm42997-202ENSMUST00000200321 985 ntBASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Gm45186-201ENSMUST00000206874 478 ntBASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms