Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm13015-201ENSMUST00000118674 204 ntBASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm13616-201ENSMUST00000120600 222 ntBASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm5779-201ENSMUST00000218467 910 ntBASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tsen54Q8C2A2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tsen54Q8C2A2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms