Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm15678-201ENSMUST00000117573 960 ntBASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm15429-201ENSMUST00000151268 798 ntBASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm5745-201ENSMUST00000183748 313 ntBASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ppp4r4Q8C0Y0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ppp4r4Q8C0Y0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm28911-201ENSMUST00000188837 117 ntBASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm5161-201ENSMUST00000075243 853 ntBASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Grk6-205ENSMUST00000224653 2976 ntBASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ppp4r4Q8C0Y0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.34□□□□□ -0.27
Ppp4r4Q8C0Y0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ppp4r4Q8C0Y0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ppp4r4Q8C0Y0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ppp4r4Q8C0Y0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms