Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Gm23984-201ENSMUST00000157139 203 ntBASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.61□□□□□ -0.23
Trub1Q8C0D0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trub1Q8C0D0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Gm11978-201ENSMUST00000122315 466 ntBASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Gm8515-201ENSMUST00000194852 576 ntBASIC13.6□□□□□ -0.23
Trub1Q8C0D0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trub1Q8C0D0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms