Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm23931-201ENSMUST00000103842 109 ntBASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm27572-201ENSMUST00000183702 255 ntBASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap1Q8BTW8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm11637-201ENSMUST00000120601 592 ntBASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm7029-201ENSMUST00000173226 450 ntBASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap1Q8BTW8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap1Q8BTW8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms