Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm18055-201ENSMUST00000208254 547 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm40466-201ENSMUST00000212174 422 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gm10146-201ENSMUST00000072739 309 ntBASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup54Q8BTS4 Grk6-205ENSMUST00000224653 2976 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Gm12384-201ENSMUST00000119228 919 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Gm14660-201ENSMUST00000119809 575 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Mir7085-201ENSMUST00000184353 66 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Gm45784-201ENSMUST00000188360 142 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup54Q8BTS4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Gm6458-201ENSMUST00000211573 635 ntBASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup54Q8BTS4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms