Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Mir1894-201ENSMUST00000122802 81 ntBASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Gm27892-201ENSMUST00000185017 106 ntBASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Gm7287-201ENSMUST00000205267 602 ntBASIC13.48□□□□□ -0.25
Sfr1Q8BP27 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sfr1Q8BP27 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gm5687-201ENSMUST00000118252 640 ntBASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gm6244-201ENSMUST00000178732 841 ntBASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sfr1Q8BP27 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sfr1Q8BP27 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms