Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp54Q8BL06 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Gm12266-201ENSMUST00000120311 962 ntBASIC18.4■□□□□ 0.54
Usp54Q8BL06 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC18.4■□□□□ 0.54
Usp54Q8BL06 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Spcs1-203ENSMUST00000226374 592 ntBASIC18.4■□□□□ 0.54
Usp54Q8BL06 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp54Q8BL06 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Mir874-201ENSMUST00000104769 76 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12616-201ENSMUST00000118594 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm13813-201ENSMUST00000120998 787 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm5863-201ENSMUST00000121760 1008 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12624-201ENSMUST00000177615 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12621-201ENSMUST00000177760 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12615-201ENSMUST00000177970 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12622-201ENSMUST00000177975 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12627-201ENSMUST00000178412 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12625-201ENSMUST00000179122 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12614-201ENSMUST00000179586 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm12613-201ENSMUST00000180323 382 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm10109-202ENSMUST00000206890 1211 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm43081-201ENSMUST00000199082 1380 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm45242-201ENSMUST00000210666 2129 ntBASIC18.39■□□□□ 0.53
Usp54Q8BL06 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp54Q8BL06 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm15515-201ENSMUST00000117827 822 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm10051-201ENSMUST00000145209 414 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 AC154276.3-201ENSMUST00000227643 998 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm13812-201ENSMUST00000118061 1347 ntBASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm13810-201ENSMUST00000118584 1347 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms