Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm13616-201ENSMUST00000120600 222 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm12403-201ENSMUST00000121384 959 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm45841-201ENSMUST00000207700 164 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2bQ8BJF9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm37935-201ENSMUST00000192012 982 ntBASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm17330-201ENSMUST00000221047 165 ntBASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms