Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.77□□□□□ -0.36
Rnf38Q8BI21 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Mir8102-201ENSMUST00000184148 139 ntBASIC12.77□□□□□ -0.37
Rnf38Q8BI21 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf38Q8BI21 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm12151-201ENSMUST00000121374 290 ntBASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Auts2-212ENSMUST00000178555 309 ntBASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm20949-201ENSMUST00000206478 952 ntBASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm5425-201ENSMUST00000214125 459 ntBASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf38Q8BI21 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms