Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Gm37917-201ENSMUST00000194711 392 ntBASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.43□□□□□ -0.42
Clrn3Q8BHH8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm38223-201ENSMUST00000194484 695 ntBASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm18307-201ENSMUST00000206864 949 ntBASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn3Q8BHH8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms