Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Samm50Q8BGH2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Samm50Q8BGH2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm43094-201ENSMUST00000196549 921 ntBASIC15.46■□□□□ 0.07
Samm50Q8BGH2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm18307-201ENSMUST00000206864 949 ntBASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Samm50Q8BGH2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms