Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Gm26927-201ENSMUST00000182385 965 ntBASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Gm42693-201ENSMUST00000196779 631 ntBASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh19Q80TF3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Mir874-201ENSMUST00000104769 76 ntBASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh19Q80TF3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Mir686-201ENSMUST00000102174 109 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms