Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Gm13385-201ENSMUST00000121089 220 ntBASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdp1Q7TSG2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ctdp1Q7TSG2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Gm27838-201ENSMUST00000184829 128 ntBASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Mir6977-201ENSMUST00000184960 64 ntBASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ctdp1Q7TSG2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms