Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Exosc3Q7TQK4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Exosc3Q7TQK4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Exosc3Q7TQK4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Exosc3Q7TQK4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gm11803-201ENSMUST00000119966 444 ntBASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gm10012-201ENSMUST00000078252 192 ntBASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Exosc3Q7TQK4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm11618-201ENSMUST00000117946 267 ntBASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm11978-201ENSMUST00000122315 466 ntBASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm8652-201ENSMUST00000181363 964 ntBASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm5745-201ENSMUST00000183748 313 ntBASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm27839-201ENSMUST00000184242 106 ntBASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.13□□□□□ -0.47
Exosc3Q7TQK4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Exosc3Q7TQK4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms