Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rad54bQ6PFE3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rad54bQ6PFE3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rad54bQ6PFE3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rad54bQ6PFE3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Gm27838-201ENSMUST00000184829 128 ntBASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Rad54bQ6PFE3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Gm15487-201ENSMUST00000122373 465 ntBASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Gm24694-201ENSMUST00000180054 110 ntBASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Mir7684-201ENSMUST00000183858 60 ntBASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Gm27663-201ENSMUST00000184839 110 ntBASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rad54bQ6PFE3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Paupar-201ENSMUST00000194826 3482 ntBASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.28□□□□□ -0.28
Rad54bQ6PFE3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms