Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd3Q6P9Z1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gm7775-201ENSMUST00000218871 853 ntBASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcd3Q6P9Z1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm17795-201ENSMUST00000214505 757 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm9063-201ENSMUST00000223299 582 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.11□□□□□ -0.47
Smarcd3Q6P9Z1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms