Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gm37917-201ENSMUST00000194711 392 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gm18624-201ENSMUST00000220966 658 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sp140Q6NSQ5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Gm7488-201ENSMUST00000117148 684 ntBASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Mir7654-201ENSMUST00000185082 70 ntBASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sp140Q6NSQ5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms