Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Phox2aQ62066 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Phox2aQ62066 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Phox2aQ62066 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.9□□□□□ -0.66
Phox2aQ62066 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Phox2aQ62066 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Phox2aQ62066 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Phox2aQ62066 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Phox2aQ62066 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Phox2aQ62066 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Phox2aQ62066 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Phox2aQ62066 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Phox2aQ62066 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Phox2aQ62066 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Olfr286-202ENSMUST00000205305 969 ntBASIC10.89□□□□□ -0.67
Phox2aQ62066 AW822252-206ENSMUST00000208904 237 ntBASIC10.89□□□□□ -0.67
Phox2aQ62066 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.89□□□□□ -0.67
Phox2aQ62066 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.89□□□□□ -0.67
Phox2aQ62066 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.89□□□□□ -0.67
Phox2aQ62066 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.89□□□□□ -0.67
Phox2aQ62066 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.89□□□□□ -0.67
Phox2aQ62066 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Phox2aQ62066 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Phox2aQ62066 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.88□□□□□ -0.67
Phox2aQ62066 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Phox2aQ62066 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.88□□□□□ -0.67
Phox2aQ62066 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.88□□□□□ -0.67
Phox2aQ62066 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Phox2aQ62066 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Phox2aQ62066 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.88□□□□□ -0.67
Phox2aQ62066 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.88□□□□□ -0.67
Phox2aQ62066 Gm11779-201ENSMUST00000118541 368 ntBASIC10.88□□□□□ -0.67
Phox2aQ62066 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Phox2aQ62066 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms