Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Gm4995-201ENSMUST00000117247 432 ntBASIC12.36□□□□□ -0.43
Sox17Q61473 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.36□□□□□ -0.43
Sox17Q61473 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.36□□□□□ -0.43
Sox17Q61473 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.36□□□□□ -0.43
Sox17Q61473 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox17Q61473 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.36□□□□□ -0.43
Sox17Q61473 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sox17Q61473 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox17Q61473 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox17Q61473 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Sox17Q61473 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox17Q61473 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Sox17Q61473 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Sox17Q61473 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox17Q61473 Gm25948-201ENSMUST00000175334 112 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Mir6990-201ENSMUST00000183724 91 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox17Q61473 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox17Q61473 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.35□□□□□ -0.43
Sox17Q61473 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox17Q61473 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.35□□□□□ -0.43
Sox17Q61473 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox17Q61473 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox17Q61473 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox17Q61473 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox17Q61473 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox17Q61473 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox17Q61473 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox17Q61473 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox17Q61473 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms