Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atf3Q60765 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf3Q60765 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.53■□□□□ 0.4
Atf3Q60765 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atf3Q60765 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 Gm13045-201ENSMUST00000119019 712 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 Gm11450-201ENSMUST00000121144 333 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC17.53■□□□□ 0.4
Atf3Q60765 Gm9540-201ENSMUST00000188230 478 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC17.53■□□□□ 0.4
Atf3Q60765 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.53■□□□□ 0.4
Atf3Q60765 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atf3Q60765 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.53■□□□□ 0.4
Atf3Q60765 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.53■□□□□ 0.4
Atf3Q60765 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Atf3Q60765 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf3Q60765 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf3Q60765 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC17.52■□□□□ 0.4
Atf3Q60765 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC17.52■□□□□ 0.4
Atf3Q60765 Gm12015-201ENSMUST00000117065 843 ntBASIC17.52■□□□□ 0.4
Atf3Q60765 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC17.52■□□□□ 0.4
Atf3Q60765 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf3Q60765 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf3Q60765 Mir6958-201ENSMUST00000184207 73 ntBASIC17.52■□□□□ 0.4
Atf3Q60765 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC17.52■□□□□ 0.4
Atf3Q60765 Gm45598-202ENSMUST00000210719 986 ntBASIC17.52■□□□□ 0.4
Atf3Q60765 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf3Q60765 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Atf3Q60765 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.52■□□□□ 0.4
Atf3Q60765 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Atf3Q60765 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf3Q60765 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf3Q60765 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf3Q60765 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Atf3Q60765 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Atf3Q60765 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC17.52■□□□□ 0.39
Atf3Q60765 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf3Q60765 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Atf3Q60765 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.51■□□□□ 0.39
Atf3Q60765 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC17.51■□□□□ 0.39
Atf3Q60765 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.51■□□□□ 0.39
Atf3Q60765 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Atf3Q60765 Gm24845-201ENSMUST00000158034 109 ntBASIC17.51■□□□□ 0.39
Atf3Q60765 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC17.51■□□□□ 0.39
Atf3Q60765 Gm6407-201ENSMUST00000176468 549 ntBASIC17.51■□□□□ 0.39
Atf3Q60765 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf3Q60765 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.51■□□□□ 0.39
Atf3Q60765 CT025551.1-201ENSMUST00000223996 692 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms