Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Foxd4Q60688 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm37469-201ENSMUST00000193728 890 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Foxd4Q60688 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm46209-201ENSMUST00000217912 553 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm16476-201ENSMUST00000221544 139 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm6888-201ENSMUST00000221983 706 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Mir497b-201ENSMUST00000093601 125 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.83□□□□□ -0.2
Foxd4Q60688 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxd4Q60688 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxd4Q60688 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.82□□□□□ -0.2
Foxd4Q60688 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Gm13740-201ENSMUST00000120590 310 ntBASIC13.82□□□□□ -0.2
Foxd4Q60688 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Gm28630-201ENSMUST00000187806 498 ntBASIC13.82□□□□□ -0.2
Foxd4Q60688 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Foxd4Q60688 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxd4Q60688 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Foxd4Q60688 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm42478-201ENSMUST00000199252 1467 ntBASIC13.81□□□□□ -0.2
Foxd4Q60688 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms