Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClpbQ60649 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ClpbQ60649 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.69□□□□□ -0.38
ClpbQ60649 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.69□□□□□ -0.38
ClpbQ60649 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ClpbQ60649 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Gm6983-201ENSMUST00000214912 628 ntBASIC12.69□□□□□ -0.38
ClpbQ60649 Gm17794-201ENSMUST00000220252 955 ntBASIC12.69□□□□□ -0.38
ClpbQ60649 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.69□□□□□ -0.38
ClpbQ60649 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.69□□□□□ -0.38
ClpbQ60649 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClpbQ60649 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.68□□□□□ -0.38
ClpbQ60649 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ClpbQ60649 Gm27892-201ENSMUST00000185017 106 ntBASIC12.68□□□□□ -0.38
ClpbQ60649 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Gm42550-201ENSMUST00000201553 960 ntBASIC12.68□□□□□ -0.38
ClpbQ60649 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Gm24447-201ENSMUST00000083977 338 ntBASIC12.68□□□□□ -0.38
ClpbQ60649 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ClpbQ60649 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.68□□□□□ -0.38
ClpbQ60649 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ClpbQ60649 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ClpbQ60649 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.68□□□□□ -0.38
ClpbQ60649 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ClpbQ60649 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.68□□□□□ -0.38
ClpbQ60649 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClpbQ60649 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.67□□□□□ -0.38
ClpbQ60649 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ClpbQ60649 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ClpbQ60649 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ClpbQ60649 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.67□□□□□ -0.38
ClpbQ60649 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ClpbQ60649 Mir1894-201ENSMUST00000122802 81 ntBASIC12.67□□□□□ -0.38
ClpbQ60649 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.67□□□□□ -0.38
ClpbQ60649 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.67□□□□□ -0.38
ClpbQ60649 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClpbQ60649 Gm8602-201ENSMUST00000184045 607 ntBASIC12.67□□□□□ -0.38
ClpbQ60649 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms