Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Satb1Q60611 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Satb1Q60611 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Satb1Q60611 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Satb1Q60611 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.72□□□□□ -0.21
Satb1Q60611 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Gm8227-201ENSMUST00000223306 571 ntBASIC13.72□□□□□ -0.21
Satb1Q60611 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.72□□□□□ -0.21
Satb1Q60611 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.72□□□□□ -0.21
Satb1Q60611 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Satb1Q60611 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Satb1Q60611 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Satb1Q60611 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Satb1Q60611 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Satb1Q60611 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Satb1Q60611 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.71□□□□□ -0.21
Satb1Q60611 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Satb1Q60611 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.71□□□□□ -0.21
Satb1Q60611 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Gm27772-201ENSMUST00000184900 187 ntBASIC13.71□□□□□ -0.21
Satb1Q60611 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.71□□□□□ -0.21
Satb1Q60611 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.71□□□□□ -0.21
Satb1Q60611 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Satb1Q60611 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.71□□□□□ -0.21
Satb1Q60611 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Satb1Q60611 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Satb1Q60611 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Satb1Q60611 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.71□□□□□ -0.22
Satb1Q60611 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.71□□□□□ -0.22
Satb1Q60611 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Satb1Q60611 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Satb1Q60611 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Satb1Q60611 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Satb1Q60611 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Satb1Q60611 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Satb1Q60611 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Satb1Q60611 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.7□□□□□ -0.22
Satb1Q60611 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Satb1Q60611 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Satb1Q60611 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.7□□□□□ -0.22
Satb1Q60611 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Mir686-201ENSMUST00000102174 109 ntBASIC13.7□□□□□ -0.22
Satb1Q60611 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.7□□□□□ -0.22
Satb1Q60611 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Gm24990-201ENSMUST00000157406 323 ntBASIC13.7□□□□□ -0.22
Satb1Q60611 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Satb1Q60611 Gm8584-201ENSMUST00000171982 758 ntBASIC13.7□□□□□ -0.22
Satb1Q60611 Mir5120-201ENSMUST00000175020 78 ntBASIC13.7□□□□□ -0.22
Satb1Q60611 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Satb1Q60611 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Satb1Q60611 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms