Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Xrcc1Q60596 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xrcc1Q60596 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xrcc1Q60596 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xrcc1Q60596 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xrcc1Q60596 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.62□□□□□ -0.39
Xrcc1Q60596 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.62□□□□□ -0.39
Xrcc1Q60596 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Gm12390-201ENSMUST00000117897 397 ntBASIC12.62□□□□□ -0.39
Xrcc1Q60596 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Gm29649-201ENSMUST00000185649 419 ntBASIC12.62□□□□□ -0.39
Xrcc1Q60596 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Gm16372-201ENSMUST00000073088 450 ntBASIC12.62□□□□□ -0.39
Xrcc1Q60596 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xrcc1Q60596 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.62□□□□□ -0.39
Xrcc1Q60596 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm4984-201ENSMUST00000115987 360 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm13829-201ENSMUST00000119600 138 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm22331-201ENSMUST00000158066 136 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm6266-201ENSMUST00000203844 806 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.61□□□□□ -0.39
Xrcc1Q60596 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xrcc1Q60596 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms