Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rn7s6-201ENSMUST00000175005 291 ntBASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 AC132260.2-201ENSMUST00000224482 344 ntBASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Trim41Q5NCC3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Mospd4-201ENSMUST00000180618 576 ntBASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gm28450-201ENSMUST00000187349 638 ntBASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 AC154176.1-201ENSMUST00000225897 220 ntBASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Gm44443-201ENSMUST00000204396 5633 ntBASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim41Q5NCC3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Trim41Q5NCC3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim41Q5NCC3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm45251-201ENSMUST00000209486 1465 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm10729-202ENSMUST00000193403 1375 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm9211-201ENSMUST00000182882 975 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm9540-201ENSMUST00000188230 478 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm5781-201ENSMUST00000219792 443 ntBASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC22.81■■□□□ 1.24
Trim41Q5NCC3 Gm10782-202ENSMUST00000223775 1480 ntBASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Gm17208-201ENSMUST00000168388 535 ntBASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC22.8■■□□□ 1.24
Trim41Q5NCC3 Gm44711-201ENSMUST00000205414 1264 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms