Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm21854-201ENSMUST00000179901 471 ntBASIC13.06□□□□□ -0.32
Scn2bQ56A07 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm27772-201ENSMUST00000184900 187 ntBASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm42612-201ENSMUST00000197986 623 ntBASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm43170-201ENSMUST00000199827 612 ntBASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.06□□□□□ -0.32
Scn2bQ56A07 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.06□□□□□ -0.32
Scn2bQ56A07 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn2bQ56A07 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.05□□□□□ -0.32
Scn2bQ56A07 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.05□□□□□ -0.32
Scn2bQ56A07 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.05□□□□□ -0.32
Scn2bQ56A07 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.05□□□□□ -0.32
Scn2bQ56A07 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms