Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Gm27516-201ENSMUST00000184237 98 ntBASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.24■□□□□ 0.03
Rc3h1Q4VGL6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Mir1247-201ENSMUST00000116706 82 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm7809-201ENSMUST00000153199 742 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm27501-201ENSMUST00000183599 107 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm43179-201ENSMUST00000198797 275 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h1Q4VGL6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm37042-201ENSMUST00000193816 581 ntBASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm38158-201ENSMUST00000194617 339 ntBASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms