Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn4Q3UWL8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pfdn4Q3UWL8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn4Q3UWL8 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Gm27533-201ENSMUST00000183800 152 ntBASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn4Q3UWL8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn4Q3UWL8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Gm22175-201ENSMUST00000175007 78 ntBASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.96□□□□□ -0.33
Pfdn4Q3UWL8 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms