Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gm42511-201ENSMUST00000196160 234 ntBASIC12.04□□□□□ -0.48
Spg11Q3UHA3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Spg11Q3UHA3 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Gm14034-201ENSMUST00000120147 551 ntBASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spg11Q3UHA3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Gm12990-201ENSMUST00000120372 468 ntBASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Gm270-201ENSMUST00000223010 976 ntBASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spg11Q3UHA3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms