Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.44□□□□□ -0.42
Brf2Q3UAW9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm7488-201ENSMUST00000117148 684 ntBASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.43□□□□□ -0.42
Brf2Q3UAW9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm13689-201ENSMUST00000119360 685 ntBASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm18624-201ENSMUST00000220966 658 ntBASIC12.42□□□□□ -0.42
Brf2Q3UAW9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms