Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rufy4Q3TYX8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rufy4Q3TYX8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm12363-201ENSMUST00000122250 668 ntBASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm25261-201ENSMUST00000157416 134 ntBASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm6007-201ENSMUST00000208170 823 ntBASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rufy4Q3TYX8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Mir1938-201ENSMUST00000158746 100 ntBASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Snora73a-201ENSMUST00000082453 205 ntBASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.51□□□□□ -0.09
Rufy4Q3TYX8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rufy4Q3TYX8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rufy4Q3TYX8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rufy4Q3TYX8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rufy4Q3TYX8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rufy4Q3TYX8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rufy4Q3TYX8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms