Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccbe1Q3MI99 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccbe1Q3MI99 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm13036-201ENSMUST00000117799 748 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm24513-201ENSMUST00000174964 138 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccbe1Q3MI99 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm14140-201ENSMUST00000119999 995 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm16026-204ENSMUST00000162652 683 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 AV026068-213ENSMUST00000223675 1171 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccbe1Q3MI99 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms