Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.99□□□□□ -0.33
Q3KNL4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.99□□□□□ -0.33
Q3KNL4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Q3KNL4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Gm9522-201ENSMUST00000182394 926 ntBASIC12.99□□□□□ -0.33
Q3KNL4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.99□□□□□ -0.33
Q3KNL4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.99□□□□□ -0.33
Q3KNL4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.99□□□□□ -0.33
Q3KNL4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Q3KNL4 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.99□□□□□ -0.33
Q3KNL4 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.99□□□□□ -0.33
Q3KNL4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Q3KNL4 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.99□□□□□ -0.33
Q3KNL4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Q3KNL4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Q3KNL4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Q3KNL4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.98□□□□□ -0.33
Q3KNL4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.98□□□□□ -0.33
Q3KNL4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Q3KNL4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.98□□□□□ -0.33
Q3KNL4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.98□□□□□ -0.33
Q3KNL4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Q3KNL4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.98□□□□□ -0.33
Q3KNL4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Q3KNL4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Q3KNL4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3KNL4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Gm12485-201ENSMUST00000119641 291 ntBASIC12.97□□□□□ -0.33
Q3KNL4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Gm27989-201ENSMUST00000184721 107 ntBASIC12.97□□□□□ -0.33
Q3KNL4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.97□□□□□ -0.33
Q3KNL4 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.97□□□□□ -0.33
Q3KNL4 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.97□□□□□ -0.33
Q3KNL4 Gm20445-201ENSMUST00000061905 565 ntBASIC12.97□□□□□ -0.33
Q3KNL4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Q3KNL4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Q3KNL4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.97□□□□□ -0.33
Q3KNL4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.97□□□□□ -0.33
Q3KNL4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3KNL4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3KNL4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3KNL4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3KNL4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.96□□□□□ -0.33
Q3KNL4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3KNL4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3KNL4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3KNL4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.96□□□□□ -0.33
Q3KNL4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms