Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Gm12241-201ENSMUST00000118330 726 ntBASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Gm3961-201ENSMUST00000204425 994 ntBASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Gm6334-201ENSMUST00000207083 228 ntBASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pkd1l3Q2EG98 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pkd1l3Q2EG98 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pkd1l3Q2EG98 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.83□□□□□ -0.51
Pkd1l3Q2EG98 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm16479-201ENSMUST00000121706 932 ntBASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm38341-201ENSMUST00000195357 515 ntBASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1l3Q2EG98 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Gm13297-201ENSMUST00000120205 934 ntBASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Gm11978-201ENSMUST00000122315 466 ntBASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Gm37042-201ENSMUST00000193816 581 ntBASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pkd1l3Q2EG98 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms