Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.71□□□□□ -0.53
Chd8Q09XV5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.71□□□□□ -0.54
Chd8Q09XV5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.71□□□□□ -0.54
Chd8Q09XV5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.71□□□□□ -0.54
Chd8Q09XV5 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gm5100-201ENSMUST00000195631 589 ntBASIC11.71□□□□□ -0.54
Chd8Q09XV5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chd8Q09XV5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.7□□□□□ -0.54
Chd8Q09XV5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gm13216-201ENSMUST00000117145 591 ntBASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gm13736-201ENSMUST00000119272 253 ntBASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Carlr-201ENSMUST00000181515 2574 ntBASIC11.7□□□□□ -0.54
Chd8Q09XV5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gm17877-201ENSMUST00000192578 814 ntBASIC11.7□□□□□ -0.54
Chd8Q09XV5 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd8Q09XV5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm22594-201ENSMUST00000104251 130 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm18801-201ENSMUST00000186616 536 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm8531-201ENSMUST00000188319 893 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm42433-201ENSMUST00000196806 940 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm17827-201ENSMUST00000211825 742 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms