Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm13369-201ENSMUST00000119442 987 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm43758-201ENSMUST00000199500 367 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm18056-201ENSMUST00000207670 568 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm18061-201ENSMUST00000208350 562 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm18063-201ENSMUST00000208529 568 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm18052-201ENSMUST00000208750 559 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm9368-201ENSMUST00000219348 831 ntBASIC13.39□□□□□ -0.27
Ebf1Q07802 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf1Q07802 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ebf1Q07802 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Gm25927-201ENSMUST00000175058 117 ntBASIC13.38□□□□□ -0.27
Ebf1Q07802 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Ebf1Q07802 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.38□□□□□ -0.27
Ebf1Q07802 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Gm16372-201ENSMUST00000073088 450 ntBASIC13.38□□□□□ -0.27
Ebf1Q07802 Gm24526-201ENSMUST00000082921 158 ntBASIC13.38□□□□□ -0.27
Ebf1Q07802 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf1Q07802 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ebf1Q07802 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf1Q07802 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.37□□□□□ -0.27
Ebf1Q07802 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf1Q07802 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf1Q07802 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf1Q07802 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf1Q07802 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf1Q07802 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Gm16379-201ENSMUST00000161469 348 ntBASIC13.37□□□□□ -0.27
Ebf1Q07802 Gm2445-201ENSMUST00000182798 989 ntBASIC13.37□□□□□ -0.27
Ebf1Q07802 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.37□□□□□ -0.27
Ebf1Q07802 Gm8762-201ENSMUST00000193486 339 ntBASIC13.37□□□□□ -0.27
Ebf1Q07802 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms