Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm12857-201ENSMUST00000117678 592 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC19.78■□□□□ 0.76
Col17a1Q07563 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC19.78■□□□□ 0.76
Col17a1Q07563 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm3551-201ENSMUST00000190750 664 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm3017-201ENSMUST00000203603 1126 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC19.78■□□□□ 0.76
Col17a1Q07563 BC106175-202ENSMUST00000219344 1213 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm4930-201ENSMUST00000219926 1087 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 AC102368.1-201ENSMUST00000227161 892 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm24943-201ENSMUST00000158329 433 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm16296-201ENSMUST00000159905 325 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm24954-201ENSMUST00000178831 110 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm7719-201ENSMUST00000182374 975 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Ighv5-11-201ENSMUST00000193354 371 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC19.77■□□□□ 0.76
Col17a1Q07563 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col17a1Q07563 Gm44913-201ENSMUST00000208060 2990 ntBASIC19.77■□□□□ 0.76
Col17a1Q07563 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col17a1Q07563 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col17a1Q07563 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Col17a1Q07563 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Col17a1Q07563 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm12020-201ENSMUST00000119030 2042 ntBASIC19.76■□□□□ 0.75
Col17a1Q07563 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm17214-201ENSMUST00000164501 541 ntBASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm17070-201ENSMUST00000170463 784 ntBASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm9135-201ENSMUST00000182963 990 ntBASIC19.76■□□□□ 0.75
Col17a1Q07563 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col17a1Q07563 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC19.76■□□□□ 0.75
Col17a1Q07563 AC129308.3-201ENSMUST00000225652 524 ntBASIC19.76■□□□□ 0.75
Col17a1Q07563 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Col17a1Q07563 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col17a1Q07563 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm13328-201ENSMUST00000120816 1020 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm6161-201ENSMUST00000121942 1102 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 n-R5s84-201ENSMUST00000122591 109 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm12906-201ENSMUST00000154610 441 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm6153-201ENSMUST00000172004 1058 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm18801-201ENSMUST00000186616 536 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm5641-202ENSMUST00000198699 1080 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC19.75■□□□□ 0.75
Col17a1Q07563 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm23680-201ENSMUST00000083162 164 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms