Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col9a1Q05722 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col9a1Q05722 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a1Q05722 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.05□□□□□ -0.32
Col9a1Q05722 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Sybu-209ENSMUST00000228639 4113 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm14938-201ENSMUST00000119482 943 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm42619-201ENSMUST00000197564 1136 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm35713-201ENSMUST00000210516 199 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm7904-201ENSMUST00000217049 465 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC13.04□□□□□ -0.32
Col9a1Q05722 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.04□□□□□ -0.32
Col9a1Q05722 AC121986.1-201ENSMUST00000218588 781 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 AC158981.3-201ENSMUST00000226844 1024 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm26831-201ENSMUST00000181458 1380 ntBASIC13.04□□□□□ -0.32
Col9a1Q05722 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Col9a1Q05722 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.04□□□□□ -0.32
Col9a1Q05722 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a1Q05722 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm26185-201ENSMUST00000157692 266 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 AC163038.1-201ENSMUST00000223632 1142 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms