Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.57□□□□□ -0.08
Col6a1Q04857 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.57□□□□□ -0.08
Col6a1Q04857 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col6a1Q04857 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Col6a1Q04857 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.57□□□□□ -0.08
Col6a1Q04857 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.57□□□□□ -0.08
Col6a1Q04857 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a1Q04857 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a1Q04857 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.56□□□□□ -0.08
Col6a1Q04857 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Gm12403-201ENSMUST00000121384 959 ntBASIC14.56□□□□□ -0.08
Col6a1Q04857 Gm2231-201ENSMUST00000125661 612 ntBASIC14.56□□□□□ -0.08
Col6a1Q04857 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Col6a1Q04857 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.56□□□□□ -0.08
Col6a1Q04857 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.56□□□□□ -0.08
Col6a1Q04857 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a1Q04857 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.56□□□□□ -0.08
Col6a1Q04857 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a1Q04857 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a1Q04857 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a1Q04857 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.55□□□□□ -0.08
Col6a1Q04857 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col6a1Q04857 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Col6a1Q04857 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a1Q04857 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Gm11439-201ENSMUST00000118598 409 ntBASIC14.55□□□□□ -0.08
Col6a1Q04857 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.55□□□□□ -0.08
Col6a1Q04857 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Gm2260-201ENSMUST00000184965 657 ntBASIC14.55□□□□□ -0.08
Col6a1Q04857 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.55□□□□□ -0.08
Col6a1Q04857 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a1Q04857 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col6a1Q04857 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a1Q04857 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms